BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A01LP1|AL427231
(691 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1289 1370 0.0
>3x_Contig1289
Length = 5567
Score = 1370 bits (691), Expect = 0.0
Identities = 691/691 (100%)
Strand = Plus / Plus
Query: 1 gatcttcatgatatcatcagaaataggttcgaacatttctaatgtcaatttattcagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gatcttcatgatatcatcagaaataggttcgaacatttctaatgtcaatttattcagcaa 492
Query: 61 tgacttcatctttcttgatgcttcttccgcgtcgtaaagttctgttccgtctggagctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tgacttcatctttcttgatgcttcttccgcgtcgtaaagttctgttccgtctggagctaa 552
Query: 121 cttgacttctgttttcttcatcttagatttaggaacccatctattagcacttgggaccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cttgacttctgttttcttcatcttagatttaggaacccatctattagcacttgggaccaa 612
Query: 181 tggggcaacctcaacctttggctcttcgacttcttcctctctgaatctttcacggtcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tggggcaacctcaacctttggctcttcgacttcttcctctctgaatctttcacggtcctt 672
Query: 241 tctggaagtgtatgatctattagattttctatcatccctctttgacttcttcttcgagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tctggaagtgtatgatctattagattttctatcatccctctttgacttcttcttcgagtt 732
Query: 301 ggacctggaacccgatctgccttcacttcttagagatccaaccttacccttactaaatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ggacctggaacccgatctgccttcacttcttagagatccaaccttacccttactaaatct 792
Query: 361 atcttcgcctcttccgcttgaaccaggcttcttaggagggatgacaattttactcgtcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 atcttcgcctcttccgcttgaaccaggcttcttaggagggatgacaattttactcgtcat 852
Query: 421 ttcagccatccacgctggatcgtatttaacatcgaccttttctttgaactgatacaagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 ttcagccatccacgctggatcgtatttaacatcgaccttttctttgaactgatacaagaa 912
Query: 481 atcaggtccgtatgcatatttaatgcttgtctttttatatctatcatttggaggcgtaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 atcaggtccgtatgcatatttaatgcttgtctttttatatctatcatttggaggcgtaat 972
Query: 541 gtcacttgggtattggaaggaataaatatcatcaactggagaaacctctttcaacttctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 gtcacttgggtattggaaggaataaatatcatcaactggagaaacctctttcaacttctg 1032
Query: 601 taggaaatcggtcatggtaatctttccatcgtcttcaacttcagcctcttctcgaggttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 taggaaatcggtcatggtaatctttccatcgtcttcaacttcagcctcttctcgaggttt 1092
Query: 661 tgtttcaacatcagcaggagtttcaacggga 691
|||||||||||||||||||||||||||||||
Sbjct: 1093 tgtttcaacatcagcaggagtttcaacggga 1123
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6035
Number of Sequences: 1807
Number of extensions: 6035
Number of successful extensions: 128
Number of sequences better than 1.0e-20: 1
length of query: 691
length of database: 10,358,551
effective HSP length: 16
effective length of query: 675
effective length of database: 10,329,639
effective search space: 6972506325
effective search space used: 6972506325
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)